track XT10_0_XB_long
bigDataUrl XENTR_10.0_longest.bb
shortLabel X. tropicalis 10.0 (longest)
longLabel Xenopus tropicalis 10.0-Xenbase (longest)
group gene_models
type bigBed 12
visibility full
searchIndex name
searchTrix XT10_0_longest.ix
priority 1

track XT10_0_transcripts
bigDataUrl XENTR_10.0_mRNAs.bb
shortLabel X. tropicalis 10.0 transcripts
longLabel Xenopus tropicalis 10.0-Xenbase transcripts
group gene_models
type bigBed 12
visibility full
searchIndex name
searchTrix XT10_0_mRNAs.ix
priority 2

track XT10_0_ENS
bigDataUrl XT10_0_ENS.bb
shortLabel XT 10.0-Ensembl
longLabel Xenopus tropicalis 10.0-Ensembl
group gene_models
type bigBed 12
visibility hide
priority 3

track XT10_0_UCB
bigDataUrl XT10_0_UCB.bb
shortLabel XT 10.0-UCB
longLabel Xenopus tropicalis 10.0-UCB (Berkeley)
group gene_models
type bigBed 12
visibility hide
priority 4

track XT10_0_morph
bigDataUrl XT10_0_morph.bb
shortLabel Morpholinos
longLabel Morpholinos
group reagents
type bigBed 12
searchIndex name
searchTrix XT10_0_morphs.ix
visibility hide
priority 6

track XT10_0_gRNA
bigDataUrl XT10_0_gRNA.bb
shortLabel gRNAs
longLabel gRNAs
group reagents
type bigBed 12
searchIndex name
searchTrix XT10_0_gRNAs.ix
visibility hide
priority 7

track 24Frogs_MAF
bigDataUrl 24Frogs_bigMaf.bb
shortLabel Multiple species alignment
longLabel Multiple species alignment (24 frogs + 2 salamanders)
group genome_cons
type bigMaf
visibility hide
color 26,26,255
frames trop_bigMafFrames.bb
summary trop_bigMaf_summary.bb
priority 10

track cas9_genes_t7_prom
bigDataUrl https://bigfrog.xenbase.org/xenbase/genomics/CRISPR/xt10_0/cas9_ngg_dt7_all.bb
shortLabel Coding guide RNAs
longLabel Guide RNAs for coding regions
group CRISPR
type bigBed 9 +
visibility squish
priority 12

track cas9_wg_sp6t7_prom
bigDataUrl https://bigfrog.xenbase.org/xenbase/genomics/CRISPR/xt10_0/cas9_ngg_dt7.bb
shortLabel Whole genome guide RNAs
longLabel Guide RNAs for whole genome
group CRISPR
type bigBed 9 +
visibility hide
priority 13

track cpf1_genes_tttv_pam
bigDataUrl https://bigfrog.xenbase.org/xenbase/genomics/CRISPR/xt10_0/lbcpf1_tttv_all.bb
shortLabel TTTV PAM coding RNAs
longLabel Guide RNAs for Coding regions TTTV PAM
group CRISPR
type bigBed 9 +
visibility hide
priority 13

track cpf1_wg_tttv_pam
bigDataUrl https://bigfrog.xenbase.org/xenbase/genomics/CRISPR/xt10_0/lbcpf1_tttv.bb
shortLabel TTV PAM genome RNAs
longLabel Guide RNAs for whole genome TTTV PAM
group CRISPR
type bigBed 9 +
visibility hide
priority 14

track cpf1_genes_tttn_pam
bigDataUrl https://bigfrog.xenbase.org/xenbase/genomics/CRISPR/xt10_0/lbcpf1_tttn_all.bb
shortLabel TTTN PAM coding RNAs
longLabel Guide RNAs for Coding regions TTTN PAM
group CRISPR
type bigBed 9 +
visibility hide
priority 15

track cpf1_wg_tttn_pam
bigDataUrl https://bigfrog.xenbase.org/xenbase/genomics/CRISPR/xt10_0/lbcpf1_tttn.bb
shortLabel TTTN PAM genome RNAs
longLabel Guide RNAs for whole genome TTTN PAM
group CRISPR
type bigBed 9 +
visibility hide
priority 16